Project Introduction
The Rice Regulome Atlas is a comprehensive resource for exploring regulatory elements in the rice genome. This project integrates multi-omics data to map chromatin accessibility, transcription factor binding sites, histone modifications, and gene expression across diverse rice varieties and tissues.
Genome Browser
Access genome browsers for different rice varieties to explore regulatory elements, gene annotations, and epigenomic data tracks.
Project Information
References
- Chen et al. (2026) DNA binding and cis-variation map of rice WRKY transcription factors. In preparation xxx.
- Liang et al. (2020) Reorganization of the 3D chromatin architecture of rice genomes during heat stress. BMC Biology 19:53.
- Li et al. (2023) Genomic variations combined with epigenetic modifications rewire open chromatin in rice. Plant Physiology 193: 1880-1896.
- Wang et al. (2022) Improved 93-11 genome and time-Course transcriptome expand resources for rice genomics. Frontiers in Plant Science 12:769700.
Funding
This project is supported by:
- Fujian Provincial Natural Science Foundation of China (Grant No. 2023J05027)
- National Natural Science Foundation of China (NSFC) Key Program (Grant No. 32130095)
- 种子创新全国重点实验室开放课题 (Grant No. SKLSI-A05)